Reliable typing of MERS-CoV variants with a small genome fragment
Identifieur interne : 001B04 ( Main/Exploration ); précédent : 001B03; suivant : 001B05Reliable typing of MERS-CoV variants with a small genome fragment
Auteurs : Saskia L. Smits [Pays-Bas] ; V. Stalin Raj [Pays-Bas] ; Suzan D. Pas [Pays-Bas] ; Chantal B. E. M. Reusken [Pays-Bas] ; Khaled Mohran [Qatar, Égypte] ; Elmoubasher A. B. A. Farag [Qatar] ; Hamad E. Al-Romaihi [Qatar] ; Mohd M. Alhajri [Qatar] ; Bart L. Haagmans [Pays-Bas] ; Marion P. Koopmans [Pays-Bas]Source :
- Journal of Clinical Virology [ 1386-6532 ] ; 2014.
Descripteurs français
- KwdFr :
- MESH :
English descriptors
- KwdEn :
- Animals, Camelus (virology), Coronavirus Infections (virology), Genome, Viral, Humans, Middle East Respiratory Syndrome Coronavirus (classification), Middle East Respiratory Syndrome Coronavirus (genetics), Molecular Typing (methods), Phylogeny, RNA, Viral (genetics), Reverse Transcriptase Polymerase Chain Reaction, Zoonoses.
- MESH :
- chemical , genetics : RNA, Viral.
- classification : Middle East Respiratory Syndrome Coronavirus.
- genetics : Middle East Respiratory Syndrome Coronavirus.
- methods : Molecular Typing.
- virology : Camelus, Coronavirus Infections.
- Animals, Genome, Viral, Humans, Phylogeny, Reverse Transcriptase Polymerase Chain Reaction, Zoonoses.
Abstract
A simple typing of The developed It allows more informative initial screening in labs with basic sequencing capacity. The data aid in informing effective international preparedness and response.
Url:
DOI: 10.1016/j.jcv.2014.12.006
PubMed: 25728084
PubMed Central: 7106551
Affiliations:
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Koopmans</name><affiliation wicri:level="1"><nlm:aff id="aff0005">Department of Viroscience, Erasmus Medical Center, P.O. Box 2040, 3000 CA Rotterdam, Netherlands</nlm:aff><country xml:lang="fr">Pays-Bas</country><wicri:regionArea>Department of Viroscience, Erasmus Medical Center, P.O. Box 2040, 3000 CA Rotterdam</wicri:regionArea><wicri:noRegion>3000 CA Rotterdam</wicri:noRegion></affiliation><affiliation wicri:level="1"><nlm:aff id="aff0030">Virology Division, Centre for Infectious Diseases Research, Diagnostics and Screening, National Institute for Public Health and the Environment, Bilthoven 3720BA, Netherlands</nlm:aff><country xml:lang="fr">Pays-Bas</country><wicri:regionArea>Virology Division, Centre for Infectious Diseases Research, Diagnostics and Screening, National Institute for Public Health and the Environment, Bilthoven 3720BA</wicri:regionArea><wicri:noRegion>Bilthoven 3720BA</wicri:noRegion></affiliation></author></titleStmt><publicationStmt><idno type="wicri:source">PMC</idno><idno type="pmid">25728084</idno><idno type="pmc">7106551</idno><idno type="url">http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7106551</idno><idno type="RBID">PMC:7106551</idno><idno type="doi">10.1016/j.jcv.2014.12.006</idno><date when="2014">2014</date><idno type="wicri:Area/Pmc/Corpus">000D95</idno><idno type="wicri:explorRef" wicri:stream="Pmc" wicri:step="Corpus" wicri:corpus="PMC">000D95</idno><idno type="wicri:Area/Pmc/Curation">000D95</idno><idno type="wicri:explorRef" wicri:stream="Pmc" wicri:step="Curation">000D95</idno><idno type="wicri:Area/Pmc/Checkpoint">000F86</idno><idno type="wicri:explorRef" wicri:stream="Pmc" wicri:step="Checkpoint">000F86</idno><idno type="wicri:source">PubMed</idno><idno type="RBID">pubmed:25728084</idno><idno type="wicri:Area/PubMed/Corpus">001686</idno><idno type="wicri:explorRef" wicri:stream="PubMed" wicri:step="Corpus" wicri:corpus="PubMed">001686</idno><idno type="wicri:Area/PubMed/Curation">001686</idno><idno type="wicri:explorRef" wicri:stream="PubMed" wicri:step="Curation">001686</idno><idno type="wicri:Area/PubMed/Checkpoint">001365</idno><idno type="wicri:explorRef" wicri:stream="Checkpoint" wicri:step="PubMed">001365</idno><idno type="wicri:Area/Ncbi/Merge">001055</idno><idno type="wicri:Area/Ncbi/Curation">001055</idno><idno type="wicri:Area/Ncbi/Checkpoint">001055</idno><idno type="wicri:doubleKey">1386-6532:2014:Smits S:reliable:typing:of</idno><idno type="wicri:Area/Main/Merge">001B12</idno><idno type="wicri:Area/Main/Curation">001B04</idno><idno type="wicri:Area/Main/Exploration">001B04</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en" level="a" type="main">Reliable typing of <italic>MERS-CoV</italic> variants with a small genome fragment</title><author><name sortKey="Smits, Saskia L" sort="Smits, Saskia L" uniqKey="Smits S" first="Saskia L." last="Smits">Saskia L. Smits</name><affiliation wicri:level="1"><nlm:aff id="aff0005">Department of Viroscience, Erasmus Medical Center, P.O. Box 2040, 3000 CA Rotterdam, Netherlands</nlm:aff><country xml:lang="fr">Pays-Bas</country><wicri:regionArea>Department of Viroscience, Erasmus Medical Center, P.O. Box 2040, 3000 CA Rotterdam</wicri:regionArea><wicri:noRegion>3000 CA Rotterdam</wicri:noRegion></affiliation><affiliation wicri:level="1"><nlm:aff id="aff0010">ViroClinics BioSciences BV, Marconistraat 16, 3029 AK Rotterdam, Netherlands</nlm:aff><country xml:lang="fr">Pays-Bas</country><wicri:regionArea>ViroClinics BioSciences BV, Marconistraat 16, 3029 AK Rotterdam</wicri:regionArea><wicri:noRegion>3029 AK Rotterdam</wicri:noRegion></affiliation></author><author><name sortKey="Raj, V Stalin" sort="Raj, V Stalin" uniqKey="Raj V" first="V. Stalin" last="Raj">V. Stalin Raj</name><affiliation wicri:level="1"><nlm:aff id="aff0005">Department of Viroscience, Erasmus Medical Center, P.O. Box 2040, 3000 CA Rotterdam, Netherlands</nlm:aff><country xml:lang="fr">Pays-Bas</country><wicri:regionArea>Department of Viroscience, Erasmus Medical Center, P.O. Box 2040, 3000 CA Rotterdam</wicri:regionArea><wicri:noRegion>3000 CA Rotterdam</wicri:noRegion></affiliation></author><author><name sortKey="Pas, Suzan D" sort="Pas, Suzan D" uniqKey="Pas S" first="Suzan D." last="Pas">Suzan D. Pas</name><affiliation wicri:level="1"><nlm:aff id="aff0005">Department of Viroscience, Erasmus Medical Center, P.O. Box 2040, 3000 CA Rotterdam, Netherlands</nlm:aff><country xml:lang="fr">Pays-Bas</country><wicri:regionArea>Department of Viroscience, Erasmus Medical Center, P.O. Box 2040, 3000 CA Rotterdam</wicri:regionArea><wicri:noRegion>3000 CA Rotterdam</wicri:noRegion></affiliation></author><author><name sortKey="Reusken, Chantal B E M" sort="Reusken, Chantal B E M" uniqKey="Reusken C" first="Chantal B. E. M." last="Reusken">Chantal B. E. M. Reusken</name><affiliation wicri:level="1"><nlm:aff id="aff0005">Department of Viroscience, Erasmus Medical Center, P.O. Box 2040, 3000 CA Rotterdam, Netherlands</nlm:aff><country xml:lang="fr">Pays-Bas</country><wicri:regionArea>Department of Viroscience, Erasmus Medical Center, P.O. Box 2040, 3000 CA Rotterdam</wicri:regionArea><wicri:noRegion>3000 CA Rotterdam</wicri:noRegion></affiliation></author><author><name sortKey="Mohran, Khaled" sort="Mohran, Khaled" uniqKey="Mohran K" first="Khaled" last="Mohran">Khaled Mohran</name><affiliation wicri:level="1"><nlm:aff id="aff0015">Ministry of the Environment, Doha, Qatar</nlm:aff><country xml:lang="fr">Qatar</country><wicri:regionArea>Ministry of the Environment, Doha</wicri:regionArea><wicri:noRegion>Doha</wicri:noRegion></affiliation><affiliation wicri:level="1"><nlm:aff id="aff0020">Biotechnology Research Department, Animal Health Research Institute, Agricultural Research Center, Egypt</nlm:aff><country xml:lang="fr">Égypte</country><wicri:regionArea>Biotechnology Research Department, Animal Health Research Institute, Agricultural Research Center</wicri:regionArea><wicri:noRegion>Agricultural Research Center</wicri:noRegion></affiliation></author><author><name sortKey="Farag, Elmoubasher A B A" sort="Farag, Elmoubasher A B A" uniqKey="Farag E" first="Elmoubasher A. B. A." last="Farag">Elmoubasher A. B. A. Farag</name><affiliation wicri:level="1"><nlm:aff id="aff0025">Supreme Council of Health, Doha, Qatar</nlm:aff><country xml:lang="fr">Qatar</country><wicri:regionArea>Supreme Council of Health, Doha</wicri:regionArea><wicri:noRegion>Doha</wicri:noRegion></affiliation></author><author><name sortKey="Al Romaihi, Hamad E" sort="Al Romaihi, Hamad E" uniqKey="Al Romaihi H" first="Hamad E." last="Al-Romaihi">Hamad E. Al-Romaihi</name><affiliation wicri:level="1"><nlm:aff id="aff0025">Supreme Council of Health, Doha, Qatar</nlm:aff><country xml:lang="fr">Qatar</country><wicri:regionArea>Supreme Council of Health, Doha</wicri:regionArea><wicri:noRegion>Doha</wicri:noRegion></affiliation></author><author><name sortKey="Alhajri, Mohd M" sort="Alhajri, Mohd M" uniqKey="Alhajri M" first="Mohd M." last="Alhajri">Mohd M. Alhajri</name><affiliation wicri:level="1"><nlm:aff id="aff0025">Supreme Council of Health, Doha, Qatar</nlm:aff><country xml:lang="fr">Qatar</country><wicri:regionArea>Supreme Council of Health, Doha</wicri:regionArea><wicri:noRegion>Doha</wicri:noRegion></affiliation></author><author><name sortKey="Haagmans, Bart L" sort="Haagmans, Bart L" uniqKey="Haagmans B" first="Bart L." last="Haagmans">Bart L. Haagmans</name><affiliation wicri:level="1"><nlm:aff id="aff0005">Department of Viroscience, Erasmus Medical Center, P.O. Box 2040, 3000 CA Rotterdam, Netherlands</nlm:aff><country xml:lang="fr">Pays-Bas</country><wicri:regionArea>Department of Viroscience, Erasmus Medical Center, P.O. Box 2040, 3000 CA Rotterdam</wicri:regionArea><wicri:noRegion>3000 CA Rotterdam</wicri:noRegion></affiliation></author><author><name sortKey="Koopmans, Marion P" sort="Koopmans, Marion P" uniqKey="Koopmans M" first="Marion P." last="Koopmans">Marion P. Koopmans</name><affiliation wicri:level="1"><nlm:aff id="aff0005">Department of Viroscience, Erasmus Medical Center, P.O. Box 2040, 3000 CA Rotterdam, Netherlands</nlm:aff><country xml:lang="fr">Pays-Bas</country><wicri:regionArea>Department of Viroscience, Erasmus Medical Center, P.O. Box 2040, 3000 CA Rotterdam</wicri:regionArea><wicri:noRegion>3000 CA Rotterdam</wicri:noRegion></affiliation><affiliation wicri:level="1"><nlm:aff id="aff0030">Virology Division, Centre for Infectious Diseases Research, Diagnostics and Screening, National Institute for Public Health and the Environment, Bilthoven 3720BA, Netherlands</nlm:aff><country xml:lang="fr">Pays-Bas</country><wicri:regionArea>Virology Division, Centre for Infectious Diseases Research, Diagnostics and Screening, National Institute for Public Health and the Environment, Bilthoven 3720BA</wicri:regionArea><wicri:noRegion>Bilthoven 3720BA</wicri:noRegion></affiliation></author></analytic><series><title level="j">Journal of Clinical Virology</title><idno type="ISSN">1386-6532</idno><idno type="eISSN">1873-5967</idno><imprint><date when="2014">2014</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Animals</term><term>Camelus (virology)</term><term>Coronavirus Infections (virology)</term><term>Genome, Viral</term><term>Humans</term><term>Middle East Respiratory Syndrome Coronavirus (classification)</term><term>Middle East Respiratory Syndrome Coronavirus (genetics)</term><term>Molecular Typing (methods)</term><term>Phylogeny</term><term>RNA, Viral (genetics)</term><term>Reverse Transcriptase Polymerase Chain Reaction</term><term>Zoonoses</term></keywords><keywords scheme="KwdFr" xml:lang="fr"><term>ARN viral (génétique)</term><term>Animaux</term><term>Chameaux (virologie)</term><term>Coronavirus du syndrome respiratoire du Moyen-Orient ()</term><term>Coronavirus du syndrome respiratoire du Moyen-Orient (génétique)</term><term>Génome viral</term><term>Humains</term><term>Infections à coronavirus (virologie)</term><term>Phylogénie</term><term>RT-PCR</term><term>Typage moléculaire ()</term><term>Zoonoses</term></keywords><keywords scheme="MESH" type="chemical" qualifier="genetics" xml:lang="en"><term>RNA, Viral</term></keywords><keywords scheme="MESH" qualifier="classification" xml:lang="en"><term>Middle East Respiratory Syndrome Coronavirus</term></keywords><keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Middle East Respiratory Syndrome Coronavirus</term></keywords><keywords scheme="MESH" qualifier="génétique" xml:lang="fr"><term>ARN viral</term><term>Coronavirus du syndrome respiratoire du Moyen-Orient</term></keywords><keywords scheme="MESH" qualifier="methods" xml:lang="en"><term>Molecular Typing</term></keywords><keywords scheme="MESH" qualifier="virologie" xml:lang="fr"><term>Chameaux</term><term>Infections à coronavirus</term></keywords><keywords scheme="MESH" qualifier="virology" xml:lang="en"><term>Camelus</term><term>Coronavirus Infections</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Animals</term><term>Genome, Viral</term><term>Humans</term><term>Phylogeny</term><term>Reverse Transcriptase Polymerase Chain Reaction</term><term>Zoonoses</term></keywords><keywords scheme="MESH" xml:lang="fr"><term>Animaux</term><term>Coronavirus du syndrome respiratoire du Moyen-Orient</term><term>Génome viral</term><term>Humains</term><term>Phylogénie</term><term>RT-PCR</term><term>Typage moléculaire</term><term>Zoonoses</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en"><title>Highlights</title><p><list list-type="simple" id="lis0005"><list-item id="lsti0005"><label>•</label><p id="par0005">A simple typing of <italic>MERS-CoV</italic> variants is crucial in monitoring the <italic>MERS-CoV</italic> outbreak.</p></list-item><list-item id="lsti0010"><label>•</label><p id="par0010">The developed <italic>MERS-CoV</italic> typing assay provides an indication of the <italic>MERS-CoV</italic> variant.</p></list-item><list-item id="lsti0015"><label>•</label><p id="par0015">It allows more informative initial screening in labs with basic sequencing capacity.</p></list-item><list-item id="lsti0020"><label>•</label><p id="par0020">The data aid in informing effective international preparedness and response.</p></list-item></list></p></div></front><back><div1 type="bibliography"><listBibl><biblStruct><analytic><author><name sortKey="The Who Mers Cov Research Group" uniqKey="The Who Mers Cov Research Group">The Who Mers-Cov Research Group</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Zaki, A M" uniqKey="Zaki A">A.M. 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Drosten</name></author></analytic></biblStruct><biblStruct></biblStruct></listBibl></div1></back></TEI><affiliations><list><country><li>Pays-Bas</li><li>Qatar</li><li>Égypte</li></country></list><tree><country name="Pays-Bas"><noRegion><name sortKey="Smits, Saskia L" sort="Smits, Saskia L" uniqKey="Smits S" first="Saskia L." last="Smits">Saskia L. Smits</name></noRegion><name sortKey="Haagmans, Bart L" sort="Haagmans, Bart L" uniqKey="Haagmans B" first="Bart L." last="Haagmans">Bart L. Haagmans</name><name sortKey="Koopmans, Marion P" sort="Koopmans, Marion P" uniqKey="Koopmans M" first="Marion P." last="Koopmans">Marion P. Koopmans</name><name sortKey="Koopmans, Marion P" sort="Koopmans, Marion P" uniqKey="Koopmans M" first="Marion P." last="Koopmans">Marion P. Koopmans</name><name sortKey="Pas, Suzan D" sort="Pas, Suzan D" uniqKey="Pas S" first="Suzan D." last="Pas">Suzan D. Pas</name><name sortKey="Raj, V Stalin" sort="Raj, V Stalin" uniqKey="Raj V" first="V. Stalin" last="Raj">V. Stalin Raj</name><name sortKey="Reusken, Chantal B E M" sort="Reusken, Chantal B E M" uniqKey="Reusken C" first="Chantal B. E. M." last="Reusken">Chantal B. E. M. Reusken</name><name sortKey="Smits, Saskia L" sort="Smits, Saskia L" uniqKey="Smits S" first="Saskia L." last="Smits">Saskia L. Smits</name></country><country name="Qatar"><noRegion><name sortKey="Mohran, Khaled" sort="Mohran, Khaled" uniqKey="Mohran K" first="Khaled" last="Mohran">Khaled Mohran</name></noRegion><name sortKey="Al Romaihi, Hamad E" sort="Al Romaihi, Hamad E" uniqKey="Al Romaihi H" first="Hamad E." last="Al-Romaihi">Hamad E. Al-Romaihi</name><name sortKey="Alhajri, Mohd M" sort="Alhajri, Mohd M" uniqKey="Alhajri M" first="Mohd M." last="Alhajri">Mohd M. Alhajri</name><name sortKey="Farag, Elmoubasher A B A" sort="Farag, Elmoubasher A B A" uniqKey="Farag E" first="Elmoubasher A. B. A." last="Farag">Elmoubasher A. B. A. Farag</name></country><country name="Égypte"><noRegion><name sortKey="Mohran, Khaled" sort="Mohran, Khaled" uniqKey="Mohran K" first="Khaled" last="Mohran">Khaled Mohran</name></noRegion></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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{{Explor lien
|wiki= Sante
|area= MersV1
|flux= Main
|étape= Exploration
|type= RBID
|clé= PMC:7106551
|texte= Reliable typing of MERS-CoV variants with a small genome fragment
}}
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